Building end-to-end solutions that bridge biology and technology through innovative computational approaches.
Selected Works
Droplet Analytics Platform
Experimental projects in the microfluidics, bioinformatics and image analysis domain.
ZebraX
ZebraX is an intelligent multi-agent system that automates systematic literature reviews and research data extraction using Google's Agent Development Kit (ADK).
Sweatlogger
Personal gym workout logger, equipped with AI, analytics, streak and shareable metrics.
More repo coming soon!
I hope I could share more open-source repositories and mini apps in the near future. Stay tuned!
Professional Experience
A journey through biotechnology, software engineering, and business development.
Full-Stack Developer / Bioinformatician
Icosagen Cell FactoryEarly-Stage Researcher (PhD Study)
Tallinn University of TechnologyData & Application Quality Control Researcher
German Startup (Research Visit)Head of Business Development
JALA TechAcademic Journey
The foundation of my interdisciplinary approach, bridging life sciences and technology.
PhD in Gene Technology
Completed doctoral studies focusing on bioinformatics and computational biology applications. Specialized in machine learning methods for biological data analysis, from supervised to deep learning approaches for object classification.
MSc in Applied Biotechnology
Multidisciplinary program combining molecular biology, biotechnology applications, and business aspects. Focused on biological macromolecules, bioprocessing, synthetic biology, and project management.
BSc in Biology
Undergraduate studies in biological sciences providing strong foundation in molecular biology, genetics, and life sciences. This background enabled the transition into computational biology and bioinformatics applications.
Research & Publications
Academic contributions and scientific papers indexed in PubMed.
High-throughput bacterial aggregation analysis in droplets.
Merili Saar-Abroi, Karoliine Lindpere, Dániel Kácsor, Triini Olman, David Gonzalez, Fenella Lucia Sulp, Katri Kiir, Immanuel Sanka, Simona Bartkova, Ott Scheler
Microfluidic production, stability and loading of synthetic giant unilamellar vesicles.
Mart Ernits, Olavi Reinsalu, Naresh Yandrapalli, Sergei Kopanchuk, Ehsan Moradpur-Tari, Immanuel Sanka, Ott Scheler, Ago Rinken, Reet Kurg, Andreas Kyritsakis, Veikko Linko, Veronika Zadin
A Guide to Biodetection in Droplets.
Simona Bartkova, Marta Zapotoczna, Immanuel Sanka, Ott Scheler
Articles & Thoughts
Writing about bioinformatics, software engineering, and everything in between.